2JED Transferase date Jan 16, 2007
title The Crystal Structure Of The Kinase Domain Of The Protein Ki Theta In Complex With Nvp-Xaa228 At 2.32a Resolution.
authors W.Stark, F.Bitsch, A.Berner, F.Buelens, P.Graff, H.Depersin, M.Gei R.Knecht, J.Rahuel, G.Rummel, J.M.Schlaeppi, R.Schmitz, A.Straus J.Wagner
compound source
Molecule: Protein Kinase C Theta
Chain: A, B
Fragment: Kinase Domain 361-706
Synonym: Npkc-Theta
Mutation: Yes
Other_details: Phosphoserine 676, Phosphoserine 695, C540 M
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
symmetry Space Group: P 65
R_factor 0.186 R_Free 0.221
length a length b length c angle alpha angle beta angle gamma
152.172 152.172 74.837 90.00 90.00 120.00
method X-Ray Diffractionresolution 2.32 Å
ligand LG8, MPD, SEP enzyme Transferase E.C. BRENDA
A, B

Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (125 Kb) [Save to disk]
  • Biological Unit Coordinates (2jed.pdb1.gz) 61 Kb
  • Biological Unit Coordinates (2jed.pdb2.gz) 61 Kb
  • LPC: Ligand-Protein Contacts for 2JED
  • CSU: Contacts of Structural Units for 2JED
  • Likely Quarternary Molecular Structure file(s) for 2JED
  • Structure Factors (587 Kb)
  • Retrieve 2JED in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2JED from S2C, [Save to disk]
  • Re-refined 2jed structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 2JED in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2JED
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 2JED, from MSDmotif at EBI
  • Fold representative 2jed from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2jed] [2jed_A] [2jed_B]
  • SWISS-PROT database: [Q04759]
  • Domain organization of [KPCT_HUMAN] by SWISSPFAM
  • Domains found in 2JED: [S_TK_X] [S_TKc ] by SMART
  • Other resources with information on 2JED
  • Community annotation for 2JED at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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