2M7Q Metal Binding Protein date Apr 29, 2013
title Solution Structure Of Tax1bp1 Ubz1+2
authors M.A.Ceregido, M.Spinola Amilibia, L.Buts, J.Bravo, N.A.J.Van Nul
compound source
Molecule: Tax1-Binding Protein 1
Chain: A
Fragment: Unp Residues 725-789
Synonym: Traf6-Binding Protein
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Tax1bp1
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_vector_type: Vector
Expression_system_vector: Pet28a
methodSolution NMR
ligand ZN enzyme
Primary referenceThe Structure of TAX1BP1 UBZ1+2 Provides Insight into Target Specificity and Adaptability., Ceregido MA, Spinola Amilibia M, Buts L, Rivera-Torres J, Garcia-Pino A, Bravo J, van Nuland NA, J Mol Biol. 2013 Nov 13. pii: S0022-2836(13)00717-1. doi:, 10.1016/j.jmb.2013.11.006. PMID:24239949
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (370 Kb) [Save to disk]
  • Biological Unit Coordinates (2m7q.pdb1.gz) 19 Kb
  • LPC: Ligand-Protein Contacts for 2M7Q
  • CSU: Contacts of Structural Units for 2M7Q
  • Original NMR restraints for 2M7Q from PDB
  • Retrieve 2M7Q in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2M7Q from S2C, [Save to disk]
  • View 2M7Q in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2M7Q
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 2M7Q, from MSDmotif at EBI
  • Fold representative 2m7q from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2m7q_A] [2m7q]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domain found in 2M7Q: [ZnF_C2H2 ] by SMART
  • Other resources with information on 2M7Q
  • Community annotation for 2M7Q at PDBWiki (http://pdbwiki.org)

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