2MF9 Apoptosis, Isomerase date Oct 08, 2013
title Solution Structure Of The N-Terminal Domain Of Human Fkbp38 (Fkbp38ntd)
authors C.Kang, H.Ye, B.Simon, M.Sattler, H.S.Yoon
compound source
Molecule: Peptidyl-Prolyl Cis-Trans Isomerase Fkbp8
Chain: A
Fragment: Unp Residues 58-206
Synonym: Ppiase Fkbp8, 38 Kda Fk506-Binding Protein, 38 Kda Fkbp-38, Hfkbp38, Fk506-Binding Protein 8, Fkbp-8, Fkbpr38,
Ec: 5.2.1.8
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Fkbp8, Fkbp38
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_vector_type: Vector
Expression_system_vector: Pet29
methodSolution NMR
ligand
enzyme Isomerase E.C.5.2.1.8 BRENDA
note 2MF9 supersedes 2JWX
Gene
Ontology
ChainFunctionProcessComponent
A


Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (885 Kb) [Save to disk]
  • Biological Unit Coordinates (2mf9.pdb1.gz) 45 Kb
  • CSU: Contacts of Structural Units for 2MF9
  • Original NMR restraints for 2MF9 from PDB
  • Retrieve 2MF9 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2MF9 from S2C, [Save to disk]
  • View 2MF9 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2MF9
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 2MF9, from MSDmotif at EBI
  • Fold representative 2mf9 from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2mf9_A] [2mf9]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 2MF9
  • Community annotation for 2MF9 at PDBWiki (http://pdbwiki.org)

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