2OVP Transcription Cell Cycle date Feb 14, 2007
title Structure Of The Skp1-Fbw7 Complex
authors B.Hao, S.Oehlmann, M.E.Sowa, J.W.Harper, N.P.Pavletich
compound source
Molecule: S-Phase Kinase-Associated Protein 1a
Chain: A
Fragment: Residues 1-147
Synonym: Skp1; Cyclin Acdk2-Associated Protein P19; P19a P19skp1; Rna Polymerase II Elongation Factor-Like Protein; Organ Of Corti Protein 2; Ocp-II Protein; Ocp-2; Transcription Elongation Factor B; Siii;
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Skp1a, Emc19, Ocp2, Skp1, Tceb1l
Expression_system: Escherichia Coli Bl21
Expression_system_taxid: 511693
Expression_system_strain: Bl21
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Engineered Pgex Vector

Molecule: F-Boxwd Repeat Protein 7
Chain: B
Fragment: N-Terminal Residues 263-707
Synonym: Fbw7; F-Box And Wd-40 Domain Protein 7; F-Box Protein Fbx30; Hcdc4; Archipelago Homolog; Hago; Sel-10;
Engineered: Yes

Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Fbxw7, Fbw7, Fbx30, Sel10
Expression_system: Escherichia Coli Bl21
Expression_system_taxid: 511693
Expression_system_strain: Bl21
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Engineered Pgex Vector
symmetry Space Group: I 41 2 2
R_factor 0.235 R_Free 0.268
crystal
cell
length a length b length c angle alpha angle beta angle gamma
222.702 222.702 102.883 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.90 Å
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceStructure of a Fbw7-Skp1-Cyclin E Complex: Multisite-Phosphorylated Substrate Recognition by SCF Ubiquitin Ligases., Hao B, Oehlmann S, Sowa ME, Harper JW, Pavletich NP, Mol Cell. 2007 Apr 13;26(1):131-43. PMID:17434132
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (101 Kb) [Save to disk]
  • Biological Unit Coordinates (2ovp.pdb1.gz) 95 Kb
  • Biological Unit Coordinates (2ovp.pdb2.gz) 373 Kb
  • CSU: Contacts of Structural Units for 2OVP
  • Likely Quarternary Molecular Structure file(s) for 2OVP
  • Structure Factors (328 Kb)
  • Retrieve 2OVP in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2OVP from S2C, [Save to disk]
  • Re-refined 2ovp structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 2OVP in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2OVP
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 2OVP, from MSDmotif at EBI
  • Fold representative 2ovp from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2ovp_B] [2ovp] [2ovp_A]
  • SWISS-PROT database: [Q969H0] [P63208]
  • Domain organization of [FBXW7_HUMAN] [SKP1_HUMAN] by SWISSPFAM
  • Domains found in 2OVP: [FBOX] [Skp1] [WD40 ] by SMART
  • Other resources with information on 2OVP
  • Community annotation for 2OVP at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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