3AGI		date
authors
compound		source
symmetry		R_factor R_Free
crystal cell	length a length b length c angle alpha angle beta angle gamma
method	X-Ray Diffraction	resolution
ligand	ACT, ARG, CL, NA	enzyme
Gene Ontology	Chain Function Process Component A
Primary reference	High-resolution X-ray analysis reveals binding of arginine to aromatic residues of lysozyme surface: implication of suppression of protein aggregation by arginine., Ito L, Shiraki K, Matsuura T, Okumura M, Hasegawa K, Baba S, Yamaguchi H, Kumasaka T, Protein Eng Des Sel. 2011 Mar;24(3):269-74. Epub 2010 Nov 17. PMID:21084280

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (57 Kb) [Save to disk] Biological Unit Coordinates (3agi.pdb1.gz) 52 Kb LPC: Ligand-Protein Contacts for 3AGI CSU: Contacts of Structural Units for 3AGI Structure Factors (501 Kb) Retrieve 3AGI in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 3AGI from S2C, [Save to disk] Re-refined 3agi structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 3AGI in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [3agi] [3agi_A] SWISS-PROT database: Domain found in 3AGI: [LYZ1 ] by SMART

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