3DIG date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand CCC, IPA, K, NA, SLZ enzyme
Primary referenceStructural insights into amino acid binding and gene control by a lysine riboswitch., Serganov A, Huang L, Patel DJ, Nature. 2008 Oct 30;455(7217):1263-7. Epub 2008 Sep 10. PMID:18784651
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (78 Kb) [Save to disk]
  • Biological Unit Coordinates (3dig.pdb1.gz) 72 Kb
  • LPC: Ligand-Protein Contacts for 3DIG
  • CSU: Contacts of Structural Units for 3DIG
  • Likely Quarternary Molecular Structure file(s) for 3DIG
  • Structure Factors (236 Kb)
  • Retrieve 3DIG in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3DIG from S2C, [Save to disk]
  • Re-refined 3dig structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 3DIG in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3dig] [3dig_X]
  • SWISS-PROT database:

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