3DJU Transcription date Jun 24, 2008
title Crystal Structure Of Human Btg2
authors X.Yang, M.Morita, H.Wang, T.Suzuki, M.Bartlam, T.Yamamoto
compound source
Molecule: Protein Btg2
Chain: B
Fragment: Unp Residues 7-128
Synonym: Ngf-Inducible Anti-Proliferative Protein Pc3
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Btg2, B-Cell Translocation Gene 2
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_strain: Bl21
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pgex6p1
symmetry Space Group: P 21 21 21
R_factor 0.194 R_Free 0.263
crystal
cell
length a length b length c angle alpha angle beta angle gamma
39.272 40.751 67.971 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.26 Å
Gene
Ontology
ChainFunctionProcessComponent
B


Primary referenceCrystal structures of human BTG2 and mouse TIS21 involved in suppression of CAF1 deadenylase activity., Yang X, Morita M, Wang H, Suzuki T, Yang W, Luo Y, Zhao C, Yu Y, Bartlam M, Yamamoto T, Rao Z, Nucleic Acids Res. 2008 Oct 30. PMID:18974182
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (24 Kb) [Save to disk]
  • Biological Unit Coordinates (3dju.pdb1.gz) 21 Kb
  • CSU: Contacts of Structural Units for 3DJU
  • Likely Quarternary Molecular Structure file(s) for 3DJU
  • Structure Factors (37 Kb)
  • Retrieve 3DJU in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3DJU from S2C, [Save to disk]
  • Re-refined 3dju structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 3DJU in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 3DJU
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 3DJU, from MSDmotif at EBI
  • Fold representative 3dju from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3dju] [3dju_B]
  • SWISS-PROT database: [P78543]
  • Domain organization of [BTG2_HUMAN] by SWISSPFAM
  • Domain found in 3DJU: [btg1 ] by SMART
  • Other resources with information on 3DJU
  • Community annotation for 3DJU at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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