3FVU Lyase, Transferase date Jan 16, 2009
title Crystal Structure Of Human Kynurenine Aminotransferase I In With Indole-3-Acetic Acid
authors Q.Han, H.Robinson, T.Cai, D.A.Tagle, J.Li
compound source
Molecule: Kynurenine--Oxoglutarate Transaminase 1
Chain: A, B
Synonym: Kynurenine--Oxoglutarate Transaminase I, Kynurenin Aminotransferase I, Kati, Glutamine--Phenylpyruvate Transam Glutamine Transaminase K, Gtk, Cysteine-S-Conjugate Beta-Ly
Ec: 2.6.1.7, 2.6.1.64, 4.4.1.13
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Ccbl1
Expression_system: Spodoptera Frugiperda
Expression_system_taxid: 7108
Expression_system_vector_type: Baculovirus
Expression_system_plasmid: Pbluebac4.5
symmetry Space Group: C 1 2 1
R_factor 0.185 R_Free 0.210
crystal
cell
length a length b length c angle alpha angle beta angle gamma
106.364 108.454 81.867 90.00 114.20 90.00
method X-Ray Diffractionresolution 1.55 Å
ligand GOL, IAC, LLP, NA enzyme Transferase E.C.2.6.1.7 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A, B


Primary referenceStructural insight into the inhibition of human kynurenine aminotransferase I/glutamine transaminase K., Han Q, Robinson H, Cai T, Tagle DA, Li J, J Med Chem. 2009 May 14;52(9):2786-93. PMID:19338303
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (154 Kb) [Save to disk]
  • Biological Unit Coordinates (3fvu.pdb1.gz) 148 Kb
  • LPC: Ligand-Protein Contacts for 3FVU
  • CSU: Contacts of Structural Units for 3FVU
  • Likely Quarternary Molecular Structure file(s) for 3FVU
  • Structure Factors (1807 Kb)
  • Retrieve 3FVU in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3FVU from S2C, [Save to disk]
  • Re-refined 3fvu structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 3FVU in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 3FVU
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 3FVU, from MSDmotif at EBI
  • Fold representative 3fvu from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3fvu_B] [3fvu] [3fvu_A]
  • SWISS-PROT database: [Q16773]
  • Domain organization of [KAT1_HUMAN] by SWISSPFAM
  • Other resources with information on 3FVU
  • Community annotation for 3FVU at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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