3FVX Transferase, Lyase date Jan 16, 2009
title Human Kynurenine Aminotransferase I In Complex With Tris
authors Q.Han, H.Robinson, T.Cai, D.A.Tagle, J.Li
compound source
Molecule: Kynurenine--Oxoglutarate Transaminase 1
Chain: A, B
Synonym: Kynurenine--Oxoglutarate Transaminase I, Kynurenine Aminotransferase I, Kati, Glutamine-- Phenylpyruvate Transaminase, Glutamine Transaminase K, Gtk, Cysteine-S-Conjugate Beta-Lyase;
Ec: 2.6.1.7, 2.6.1.64, 4.4.1.13
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Ccbl1
Expression_system: Spodoptera Frugiperda
Expression_system_taxid: 7108
Expression_system_vector_type: Baculovirus
Expression_system_plasmid: Pbluebac4.5
symmetry Space Group: C 1 2 1
R_factor 0.178 R_Free 0.200
crystal
cell
length a length b length c angle alpha angle beta angle gamma
102.881 107.439 81.686 90.00 112.87 90.00
method X-Ray Diffractionresolution 1.50 Å
ligand LLP, NA, TRS enzyme Transferase E.C.2.6.1.7 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A, B


Primary referenceStructural insight into the inhibition of human kynurenine aminotransferase I/glutamine transaminase K., Han Q, Robinson H, Cai T, Tagle DA, Li J, J Med Chem. 2009 May 14;52(9):2786-93. PMID:19338303
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (153 Kb) [Save to disk]
  • Biological Unit Coordinates (3fvx.pdb1.gz) 148 Kb
  • LPC: Ligand-Protein Contacts for 3FVX
  • CSU: Contacts of Structural Units for 3FVX
  • Likely Quarternary Molecular Structure file(s) for 3FVX
  • Structure Factors (1919 Kb)
  • Retrieve 3FVX in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3FVX from S2C, [Save to disk]
  • Re-refined 3fvx structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 3FVX in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 3FVX
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 3FVX, from MSDmotif at EBI
  • Fold representative 3fvx from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3fvx_A] [3fvx] [3fvx_B]
  • SWISS-PROT database: [Q16773]
  • Domain organization of [KAT1_HUMAN] by SWISSPFAM
  • Other resources with information on 3FVX
  • Community annotation for 3FVX at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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