3OK4 Crystal structure of the ANA:RNA decamer suffering from lattice translocation defects date
authors Ovaere, M., Meervelt, L.Van.
compound source
symmetry
R_factor
R_Free 0.25288
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 1.15
ligand A6A, A6C, A6G, A6U, PO4 enzyme
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (165 Kb) [Save to disk]
  • Biological Unit Coordinates (3ok4.pdb1.gz) 11 Kb
  • Biological Unit Coordinates (3ok4.pdb2.gz) 11 Kb
  • Biological Unit Coordinates (3ok4.pdb3.gz) 11 Kb
  • Biological Unit Coordinates (3ok4.pdb4.gz) 11 Kb
  • Biological Unit Coordinates (3ok4.pdb5.gz) 11 Kb
  • Biological Unit Coordinates (3ok4.pdb6.gz) 11 Kb
  • Biological Unit Coordinates (3ok4.pdb7.gz) 11 Kb
  • Biological Unit Coordinates (3ok4.pdb8.gz) 11 Kb
  • Biological Unit Coordinates (3ok4.pdb9.gz) 11 Kb
  • LPC: Ligand-Protein Contacts for 3OK4
  • CSU: Contacts of Structural Units for 3OK4
  • Structure Factors (1006 Kb)
  • Retrieve 3OK4 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3OK4 from S2C, [Save to disk]
  • Re-refined 3ok4 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 3OK4 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 3OK4
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 3OK4, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3ok4] [3ok4_P] [3ok4_D] [3ok4_X] [3ok4_J] [3ok4_I] [3ok4_3] [3ok4_W] [3ok4_V] [3ok4_E] [3ok4_1] [3ok4_N] [3ok4_F] [3ok4_4] [3ok4_C] [3ok4_B] [3ok4_U] [3ok4_S] [3ok4_L] [3ok4_R] [3ok4_G] [3ok4_Y] [3ok4_K] [3ok4_Q] [3ok4_A] [3ok4_H] [3ok4_O] [3ok4_M] [3ok4_T] [3ok4_2] [3ok4_Z]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 3OK4
  • Community annotation for 3OK4 at PDBWiki (http://pdbwiki.org)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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