3OLH Transferase date Aug 26, 2010
title Human 3-Mercaptopyruvate Sulfurtransferase
authors T.Karlberg, R.Collins, C.H.Arrowsmith, H.Berglund, C.Bountra, A.M S.Flodin, A.Flores, S.Graslund, M.Hammarstrom, I.Johansson, T.Ko E.Kouznetsova, M.Moche, P.Nordlund, T.Nyman, C.Persson, P.Schutz M.I.Siponen, A.G.Thorsell, L.Tresaugues, S.Van Den Berg, E.Wahl J.Weigelt, M.Welin, H.Schuler, Structural Genomics Consortium
compound source
Molecule: 3-Mercaptopyruvate Sulfurtransferase
Chain: A
Fragment: Unp Residuse 11-289
Synonym: Mst
Ec: 2.8.1.2
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Mpst, Tst2
Expression_system: Escherichia Coli
Expression_system_taxid: 469008
Expression_system_strain: Bl21(De3) R3 Prare
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pnic-Bsa4
symmetry Space Group: H 3 2
R_factor 0.221 R_Free 0.270
crystal
cell
length a length b length c angle alpha angle beta angle gamma
171.314 171.314 75.764 90.00 90.00 120.00
method X-Ray Diffractionresolution 2.50 Å
ligand NA, SO4 enzyme Transferase E.C.2.8.1.2 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A


Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (101 Kb) [Save to disk]
  • Biological Unit Coordinates (3olh.pdb1.gz) 94 Kb
  • LPC: Ligand-Protein Contacts for 3OLH
  • CSU: Contacts of Structural Units for 3OLH
  • Structure Factors (124 Kb)
  • Retrieve 3OLH in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3OLH from S2C, [Save to disk]
  • Re-refined 3olh structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 3OLH in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 3OLH
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 3OLH, from MSDmotif at EBI
  • Fold representative 3olh from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3olh] [3olh_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domain found in 3OLH: [RHOD ] by SMART
  • Other resources with information on 3OLH
  • Community annotation for 3OLH at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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