3Q6C X-ray crystal structure of duf2500 (pf10694) from klebsiella pneumoniae, northeast structural genomics consortium target kpr96 date
authors Seetharaman, J., Su, M., Wang, D., Ciccosanti, C., Sahdev, S., Nair, R., Rost, B., Acton, T.B., Xiao, R., Everett, J.K., Montelione, G.T., Hunt, J.F., Tong, L., NESG, Northeast.Structural.Genomics.Consortium.
compound source
symmetry
R_factor
R_Free 0.284
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 2.60
ligand MSE enzyme
note 3Q6C is a representative structure
Gene KVAR
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (190 Kb) [Save to disk]
  • Biological Unit Coordinates (3q6c.pdb1.gz) 15 Kb
  • Biological Unit Coordinates (3q6c.pdb2.gz) 15 Kb
  • Biological Unit Coordinates (3q6c.pdb3.gz) 14 Kb
  • Biological Unit Coordinates (3q6c.pdb4.gz) 14 Kb
  • Biological Unit Coordinates (3q6c.pdb5.gz) 14 Kb
  • Biological Unit Coordinates (3q6c.pdb6.gz) 14 Kb
  • Biological Unit Coordinates (3q6c.pdb7.gz) 14 Kb
  • Biological Unit Coordinates (3q6c.pdb8.gz) 26 Kb
  • Biological Unit Coordinates (3q6c.pdb9.gz) 16 Kb
  • LPC: Ligand-Protein Contacts for 3Q6C
  • CSU: Contacts of Structural Units for 3Q6C
  • Structure Factors (576 Kb)
  • Retrieve 3Q6C in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3Q6C from S2C, [Save to disk]
  • Re-refined 3q6c structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 3Q6C in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 3Q6C
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 3Q6C, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3q6c_N] [3q6c_G] [3q6c_O] [3q6c_J] [3q6c_H] [3q6c_E] [3q6c_C] [3q6c_L] [3q6c_M] [3q6c_F] [3q6c_D] [3q6c_P] [3q6c_K] [3q6c_B] [3q6c] [3q6c_I] [3q6c_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
    • Other resources with information on 3Q6C
  • Community annotation for 3Q6C at PDBWiki (http://pdbwiki.org)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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