3T58 Oxidoreductase date Jul 27, 2011
title C76ac455s Mutant Of Mouse Qsox1 Containing An Interdomain D
authors D.Fass, A.Alon, Y.Gat
compound source
Molecule: Sulfhydryl Oxidase 1
Chain: A, B, C, D
Fragment: Unp Residues 36-550
Synonym: Msox, Quiescin Q6, Skin Sulfhydryl Oxidase
Ec: 1.8.3.2
Engineered: Yes
Mutation: Yes
Organism_scientific: Mus Musculus
Organism_common: Mouse
Organism_taxid: 10090
Gene: Qscn6, Qsox1, Qsox1b, Sox
Expression_system: Escherichia Coli
Expression_system_taxid: 469008
Expression_system_strain: Bl21(De3) Plyss
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pet15b
symmetry Space Group: P 21 21 21
R_factor 0.218 R_Free 0.259
crystal
cell
length a length b length c angle alpha angle beta angle gamma
82.871 148.638 215.789 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.40 Å
ligand FAD enzyme Oxidoreductase E.C.1.8.3.2 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A, D, C, B


Primary referenceThe dynamic disulphide relay of quiescin sulphydryl oxidase., Alon A, Grossman I, Gat Y, Kodali VK, DiMaio F, Mehlman T, Haran G, Baker D, Thorpe C, Fass D, Nature. 2012 Aug 16;488(7411):414-8. PMID:22801504
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (355 Kb) [Save to disk]
  • Biological Unit Coordinates (3t58.pdb1.gz) 93 Kb
  • Biological Unit Coordinates (3t58.pdb2.gz) 93 Kb
  • Biological Unit Coordinates (3t58.pdb3.gz) 90 Kb
  • Biological Unit Coordinates (3t58.pdb4.gz) 89 Kb
  • LPC: Ligand-Protein Contacts for 3T58
  • CSU: Contacts of Structural Units for 3T58
  • Structure Factors (845 Kb)
  • Retrieve 3T58 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3T58 from S2C, [Save to disk]
  • Re-refined 3t58 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 3T58 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 3T58
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 3T58, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3t58_D] [3t58_A] [3t58_C] [3t58_B] [3t58]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 3T58
  • Community annotation for 3T58 at PDBWiki (http://pdbwiki.org)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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