3VNY		date
authors
compound		source
symmetry		R_factor R_Free
crystal cell	length a length b length c angle alpha angle beta angle gamma
method	X-Ray Diffraction	resolution
ligand	GOL, PO4	enzyme
note	3VNY is a representative structure
Gene	ACP
Gene Ontology	Chain Function Process Component A
Primary reference	Structural and biochemical characterization of glycoside hydrolase family 79 beta-glucuronidase from Acidobacterium capsulatum., Michikawa M, Ichinose H, Momma M, Biely P, Jongkees S, Yoshida M, Kotake T, Tsumuraya Y, Withers SG, Fujimoto Z, Kaneko S, J Biol Chem. 2012 Apr 20;287(17):14069-77. Epub 2012 Feb 24. PMID:22367201

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (89 Kb) [Save to disk] Biological Unit Coordinates (3vny.pdb1.gz) 84 Kb Biological Unit Coordinates (3vny.pdb2.gz) 166 Kb Biological Unit Coordinates (3vny.pdb3.gz) 330 Kb LPC: Ligand-Protein Contacts for 3VNY CSU: Contacts of Structural Units for 3VNY Structure Factors (1655 Kb) Retrieve 3VNY in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 3VNY from S2C, [Save to disk] Re-refined 3vny structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 3VNY in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [3vny] [3vny_A] SWISS-PROT database:

You may enter another PDB ID code

Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]

---

OCA© by Jaime Prilusky, 1996-2014,2022,2024 Bioinformatics Unit Weizmann Institute of Science

---