3WJA	Oxidoreductase	date	Oct 08, 2013
title	The Crystal Structure Of Human Cytosolic Nadp(+)-Dependent M Enzyme In Apo Form
authors	S.Y.Li, M.C.Chen, P.C.Yang, N.L.Chan, J.H.Liu, H.C.Hung
compound		source
Molecule: Nadp-Dependent Malic Enzyme Chain: A, B Synonym: Cytosolic Nadp(+)-Dependent Malic Enzyme, Nadp-Me, Enzyme 1; Ec: 1.1.1.40 Engineered: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Gene: Me1 Expression_system: Escherichia Coli Expression_system_taxid: 562 Expression_system_strain: Bl21(De3) Expression_system_vector_type: Plasmid Expression_system_plasmid: Pet21b
symmetry	Space Group: P 2 21 21	R_factor 0.182 R_Free 0.222
crystal cell	length a length b length c angle alpha angle beta angle gamma 70.213 116.138 182.403 90.00 90.00 90.00
method	X-Ray Diffraction	resolution	2.55 Å
ligand		enzyme	Oxidoreductase E.C.1.1.1.40 BRENDA
Gene Ontology	Chain Function Process Component A, B electron transfer activity
Primary reference	Structural characteristics of the nonallosteric human cytosolic malic enzyme., Hsieh JY, Li SY, Chen MC, Yang PC, Chen HY, Chan NL, Liu JH, Hung HC, Biochim Biophys Acta. 2014 Jul 3;1844(10):1773-1783. doi:, 10.1016/j.bbapap.2014.06.019. PMID:24998673

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (545 Kb) [Save to disk] Biological Unit Coordinates (3wja.pdb1.gz) 1075 Kb CSU: Contacts of Structural Units for 3WJA Structure Factors (487 Kb) Retrieve 3WJA in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 3WJA from S2C, [Save to disk] Re-refined 3wja structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 3WJA in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 3WJA

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 3WJA, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [3wja_A] [3wja] [3wja_B] SWISS-PROT database: Domain organization of by SWISSPFAM Domains found in 3WJA: [Malic_M] [malic ] by SMART

Other resources with information on 3WJA

Community annotation for 3WJA at PDBWiki (http://pdbwiki.org)

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