4FMA EspG structure date
authors Shao, F., Zhu, Y., Hu, L.
compound source
symmetry
R_factor
R_Free 0.2388
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 2.15
ligand ACY, FMT, MG enzyme
Gene
Ontology
ChainFunctionProcessComponent
F, A, J, K, E, B, H, C, D, I, G, L


Primary referenceStructurally Distinct Bacterial TBC-like GAPs Link Arf GTPase to Rab1 Inactivation to Counteract Host Defenses., Dong N, Zhu Y, Lu Q, Hu L, Zheng Y, Shao F, Cell. 2012 Aug 31;150(5):1029-41. PMID:22939626
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (1362 Kb) [Save to disk]
  • Biological Unit Coordinates (4fma.pdb1.gz) 122 Kb
  • Biological Unit Coordinates (4fma.pdb2.gz) 123 Kb
  • Biological Unit Coordinates (4fma.pdb3.gz) 122 Kb
  • Biological Unit Coordinates (4fma.pdb4.gz) 120 Kb
  • Biological Unit Coordinates (4fma.pdb5.gz) 122 Kb
  • Biological Unit Coordinates (4fma.pdb6.gz) 120 Kb
  • Biological Unit Coordinates (4fma.pdb7.gz) 119 Kb
  • Biological Unit Coordinates (4fma.pdb8.gz) 122 Kb
  • Biological Unit Coordinates (4fma.pdb9.gz) 120 Kb
  • LPC: Ligand-Protein Contacts for 4FMA
  • CSU: Contacts of Structural Units for 4FMA
  • Structure Factors (2394 Kb)
  • Retrieve 4FMA in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4FMA from S2C, [Save to disk]
  • Re-refined 4fma structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 4FMA in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 4FMA
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 4FMA, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4fma] [4fma_E] [4fma_H] [4fma_L] [4fma_G] [4fma_C] [4fma_F] [4fma_J] [4fma_D] [4fma_B] [4fma_K] [4fma_I] [4fma_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
    • Other resources with information on 4FMA
  • Community annotation for 4FMA at PDBWiki (http://pdbwiki.org)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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