4NOD date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand BRU enzyme
Primary referenceDistinct structural features of TFAM drive mitochondrial DNA packaging versus transcriptional activation., Ngo HB, Lovely GA, Phillips R, Chan DC, Nat Commun. 2014 Jan 17;5:3077. doi: 10.1038/ncomms4077. PMID:24435062
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (420 Kb) [Save to disk]
  • Biological Unit Coordinates (4nod.pdb1.gz) 105 Kb
  • Biological Unit Coordinates (4nod.pdb2.gz) 104 Kb
  • Biological Unit Coordinates (4nod.pdb3.gz) 104 Kb
  • Biological Unit Coordinates (4nod.pdb4.gz) 104 Kb
  • LPC: Ligand-Protein Contacts for 4NOD
  • CSU: Contacts of Structural Units for 4NOD
  • Structure Factors (1847 Kb)
  • Retrieve 4NOD in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4NOD from S2C, [Save to disk]
  • Re-refined 4nod structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 4NOD in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4nod] [4nod_A] [4nod_B] [4nod_C] [4nod_D] [4nod_E] [4nod_F] [4nod_G] [4nod_H] [4nod_I] [4nod_J] [4nod_K] [4nod_L]
  • SWISS-PROT database:
  • Domain found in 4NOD: [HMG ] by SMART

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