4YOT date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand MG enzyme
Gene
Ontology
ChainFunctionProcessComponent
C, B, A
  • exonuclease activity


    • Primary referenceStructural basis for substrate recognition and processive cleavage mechanisms of the trimeric exonuclease PhoExo I., Miyazono KI, Ishino S, Tsutsumi K, Ito T, Ishino Y, Tanokura M, Nucleic Acids Res. 2015 Jul 2. pii: gkv654. PMID:26138487
    Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (229 Kb) [Save to disk]
  • Biological Unit Coordinates (4yot.pdb1.gz) 222 Kb
  • LPC: Ligand-Protein Contacts for 4YOT
  • CSU: Contacts of Structural Units for 4YOT
  • Structure Factors (785 Kb)
  • Retrieve 4YOT in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4YOT from S2C, [Save to disk]
  • Re-refined 4yot structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 4YOT in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4yot_C] [4yot] [4yot_A] [4yot_B]
  • SWISS-PROT database:

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