5CTV date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand AMV, DAL, DGL, NAG enzyme
Gene SP
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceThe crystal structure of the major pneumococcal autolysin LytA in complex with a large peptidoglycan fragment reveals the pivotal role of glycans for lytic activity., Sandalova T, Lee M, Henriques-Normark B, Hesek D, Mobashery S, Mellroth P, Achour A, Mol Microbiol. 2016 Jun 7. doi: 10.1111/mmi.13435. PMID:27273793
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (73 Kb) [Save to disk]
  • Biological Unit Coordinates (5ctv.pdb1.gz) 68 Kb
  • LPC: Ligand-Protein Contacts for 5CTV
  • CSU: Contacts of Structural Units for 5CTV
  • Structure Factors (4685 Kb)
  • Retrieve 5CTV in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5CTV from S2C, [Save to disk]
  • Re-refined 5ctv structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 5CTV in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5ctv] [5ctv_A] [5ctv_C] [5ctv_E]
  • SWISS-PROT database:
  • Domain found in 5CTV: [Ami_2 ] by SMART

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