OCA Atlas for 5DO9

5DO9

date

authors

compound

source

symmetry

R_factor

R_Free

crystal
cell

length a	length b	length c	angle alpha	angle beta	angle gamma

method

X-Ray Diffraction

resolution

ligand

ALF, GDP, MG

enzyme

Gene
Ontology

Chain	Function	Process	Component
B, D, F
E, C, A

Primary reference

Structure of the Regulator of G Protein Signaling 8 (RGS8)-Galphaq Complex: Molecular Basis for Galpha Selectivity., Taylor VG, Bommarito PA, Tesmer JJ, J Biol Chem. 2016 Jan 11. pii: jbc.M115.712075. PMID:26755720

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (476 Kb) [Save to disk]

Biological Unit Coordinates (5do9.pdb1.gz) 159 Kb

Biological Unit Coordinates (5do9.pdb2.gz) 160 Kb

Biological Unit Coordinates (5do9.pdb3.gz) 159 Kb

Biological Unit Coordinates (5do9.pdb4.gz) 158 Kb

Biological Unit Coordinates (5do9.pdb5.gz) 160 Kb

Biological Unit Coordinates (5do9.pdb6.gz) 159 Kb

LPC: Ligand-Protein Contacts for 5DO9

CSU: Contacts of Structural Units for 5DO9

Structure Factors (1635 Kb)

Retrieve 5DO9 in mmCIF format [Save to disk]

SEQRES to COORDINATES correlation for 5DO9 from S2C, [Save to disk]

Re-refined 5do9 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 5DO9 in 3D

Proteopedia, because life has more than 2D.

On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.

On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [5do9] [5do9_A] [5do9_B] [5do9_C] [5do9_D] [5do9_E] [5do9_F]

SWISS-PROT database:

Domains found in 5DO9: [G_alpha] [RGS ] by SMART

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