5DTB date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand GLU, GOL, NA enzyme
Gene DMEL
Gene
Ontology
ChainFunctionProcessComponent
A, B


Primary referenceNovel Functional Properties of Drosophila CNS Glutamate Receptors., Li Y, Dharkar P, Han TH, Serpe M, Lee CH, Mayer ML, Neuron. 2016 Dec 7;92(5):1036-1048. doi: 10.1016/j.neuron.2016.10.058. Epub 2016 , Nov 23. PMID:27889096
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (267 Kb) [Save to disk]
  • Biological Unit Coordinates (5dtb.pdb1.gz) 259 Kb
  • LPC: Ligand-Protein Contacts for 5DTB
  • CSU: Contacts of Structural Units for 5DTB
  • Structure Factors (856 Kb)
  • Retrieve 5DTB in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5DTB from S2C, [Save to disk]
  • Re-refined 5dtb structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 5DTB in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5dtb] [5dtb_A] [5dtb_B]
  • SWISS-PROT database:
  • Domains found in 5DTB: [Lig_chan-Glu_bd] [PBPb] [PBPe ] by SMART

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