5E8R Transferase date Oct 14, 2015
title Human Hmt1 Hnrnp Methyltransferase-Like Protein 6 (S. Cerevi
authors A.Dong, H.Zeng, J.Liu, W.Tempel, A.Seitova, A.Hutchinson, C.Bountr C.H.Arrowsmith, A.M.Edwards, J.Jin, P.J.Brown, H.Wu, Structural Consortium (Sgc)
compound source
Molecule: Protein Arginine N-Methyltransferase 6
Chain: A, B
Synonym: Heterogeneous Nuclear Ribonucleoprotein Methyltran Like Protein 6,Histone-Arginine N-Methyltransferase Prmt6;
Ec: 2.1.1.-,2.1.1.125
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Prmt6, Hrmt1l6
Expression_system: Spodoptera Frugiperda
Expression_system_taxid: 7108
Expression_system_strain: Sf9
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pfboh-Mhl
symmetry Space Group: P 43
R_factor 0.220 R_Free 0.256
crystal
cell
length a length b length c angle alpha angle beta angle gamma
100.244 100.244 89.868 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.55 Å
ligand 5L6, CL, SAH, UNX enzyme Transferase E.C.2.1.1 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A, B
  • histone methyltransferase ac...


  • Primary referenceA Potent, Selective and Cell-active Inhibitor of Human Type I Protein Arginine Methyltransferases., Eram MS, Shen Y, Szewczyk M, Wu H, Senisterra G, Li F, Butler KV, Kaniskan HU, Speed BA, Dela Sena C, Dong A, Zeng H, Schapira M, Brown PJ, Arrowsmith CH, Barsyte-Lovejoy D, Liu J, Vedadi M, Jin J, ACS Chem Biol. 2015 Nov 24. PMID:26598975
    Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (113 Kb) [Save to disk]
  • Biological Unit Coordinates (5e8r.pdb1.gz) 107 Kb
  • LPC: Ligand-Protein Contacts for 5E8R
  • CSU: Contacts of Structural Units for 5E8R
  • Structure Factors (1502 Kb)
  • Retrieve 5E8R in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5E8R from S2C, [Save to disk]
  • Re-refined 5e8r structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 5E8R in 3D
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  • Visual 3D analysis of 5E8R
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  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • Fold representative 5e8r from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5e8r_A] [5e8r] [5e8r_B]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 5E8R
  • Community annotation for 5E8R at PDBWiki (http://pdbwiki.org)

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