OCA Atlas for 5FOO

5FOO

date

authors

compound

source

symmetry

R_factor

R_Free

crystal
cell

length a	length b	length c	angle alpha	angle beta	angle gamma

method

X-Ray Diffraction

resolution

ligand

CL, EDO, JAZ, PO4, TRS

enzyme

Gene
Ontology

Chain	Function	Process	Component
C, B, A, E, D, F

Primary reference

Chemoenzymatic synthesis of 6-phospho-cyclophellitol as a novel probe of 6-phospho-beta-glucosidases., Kwan DH, Jin Y, Jiang J, Chen HM, Kotzler MP, Overkleeft HS, Davies GJ, Withers SG, FEBS Lett. 2016 Feb;590(4):461-8. doi: 10.1002/1873-3468.12059. Epub 2016 Feb 14. PMID:26790390

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (476 Kb) [Save to disk]

Biological Unit Coordinates (5foo.pdb1.gz) 83 Kb

Biological Unit Coordinates (5foo.pdb2.gz) 85 Kb

Biological Unit Coordinates (5foo.pdb3.gz) 83 Kb

Biological Unit Coordinates (5foo.pdb4.gz) 83 Kb

Biological Unit Coordinates (5foo.pdb5.gz) 83 Kb

Biological Unit Coordinates (5foo.pdb6.gz) 83 Kb

LPC: Ligand-Protein Contacts for 5FOO

CSU: Contacts of Structural Units for 5FOO

Structure Factors (11270 Kb)

Retrieve 5FOO in mmCIF format [Save to disk]

SEQRES to COORDINATES correlation for 5FOO from S2C, [Save to disk]

Re-refined 5foo structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 5FOO in 3D

Proteopedia, because life has more than 2D.

On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.

On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [5foo] [5foo_A] [5foo_B] [5foo_C] [5foo_D] [5foo_E] [5foo_F]

SWISS-PROT database:

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