5GMF		date
authors
compound		source
symmetry		R_factor R_Free
crystal cell	length a length b length c angle alpha angle beta angle gamma
method	X-Ray Diffraction	resolution
ligand	CA, GMP, NAG	enzyme
Gene Ontology	Chain Function Process Component D, B, C, A
Primary reference	Structural Analysis Reveals that Toll-like Receptor 7 Is a Dual Receptor for Guanosine and Single-Stranded RNA., Zhang Z, Ohto U, Shibata T, Krayukhina E, Taoka M, Yamauchi Y, Tanji H, Isobe T, Uchiyama S, Miyake K, Shimizu T, Immunity. 2016 Oct 18;45(4):737-748. doi: 10.1016/j.immuni.2016.09.011. Epub 2016, Oct 11. PMID:27742543

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (524 Kb) [Save to disk] Biological Unit Coordinates (5gmf.pdb1.gz) 260 Kb Biological Unit Coordinates (5gmf.pdb2.gz) 260 Kb LPC: Ligand-Protein Contacts for 5GMF CSU: Contacts of Structural Units for 5GMF Structure Factors (3420 Kb) Retrieve 5GMF in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 5GMF from S2C, [Save to disk] Re-refined 5gmf structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 5GMF in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [5gmf] [5gmf_A] [5gmf_B] [5gmf_C] [5gmf_D] [5gmf_E] [5gmf_F] [5gmf_G] [5gmf_H] SWISS-PROT database: Domains found in 5GMF: [LRR] [LRRCT] [LRRNT] [LRR_TYP ] by SMART

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