OCA Atlas for 5GNJ

5GNJ

date

authors

compound

source

symmetry

R_factor

R_Free

crystal
cell

length a	length b	length c	angle alpha	angle beta	angle gamma

method

X-Ray Diffraction

resolution

Gene
Ontology

Chain	Function	Process	Component
B, M, A, I, E, G, N, F

Primary reference

Crystal Structure of Tetrameric Arabidopsis MYC2 Reveals the Mechanism of Enhanced Interaction with DNA., Lian TF, Xu YP, Li LF, Su XD, Cell Rep. 2017 May 16;19(7):1334-1342. doi: 10.1016/j.celrep.2017.04.057. PMID:28514654

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (297 Kb) [Save to disk]

Biological Unit Coordinates (5gnj.pdb1.gz) 73 Kb

Biological Unit Coordinates (5gnj.pdb2.gz) 75 Kb

Biological Unit Coordinates (5gnj.pdb3.gz) 72 Kb

Biological Unit Coordinates (5gnj.pdb4.gz) 71 Kb

CSU: Contacts of Structural Units for 5GNJ

Structure Factors (282 Kb)

Retrieve 5GNJ in mmCIF format [Save to disk]

SEQRES to COORDINATES correlation for 5GNJ from S2C, [Save to disk]

Re-refined 5gnj structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 5GNJ in 3D

Proteopedia, because life has more than 2D.

On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.

On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [5gnj_I] [5gnj] [5gnj_A] [5gnj_B] [5gnj_C] [5gnj_D] [5gnj_E] [5gnj_F] [5gnj_G] [5gnj_H] [5gnj_J] [5gnj_K] [5gnj_L] [5gnj_M] [5gnj_N] [5gnj_O] [5gnj_P]

SWISS-PROT database:

Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]