5I0H Motor Protein date Feb 04, 2016
title Crystal Structure Of Myosin X Motor Domain In Pre-Powerstrok
authors T.Isabet, F.Blanc, H.L.Sweeney, A.Houdusse
compound source
Molecule: Unconventional Myosin-X
Chain: A, B
Synonym: Unconventional Myosin-10
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Myo10, Kiaa0799
Expression_system: Unidentified Baculovirus
Expression_system_taxid: 10469
symmetry Space Group: P 1
R_factor 0.165 R_Free 0.190
crystal
cell
length a length b length c angle alpha angle beta angle gamma
76.480 78.300 78.670 75.69 86.38 76.12
method X-Ray Diffractionresolution 1.80 Å
ligand ADP, BEF, EDO, MG, SO4 enzyme
Gene
Ontology
ChainFunctionProcessComponent
A, B


Primary referenceThe myosin X motor is optimized for movement on actin bundles., Ropars V, Yang Z, Isabet T, Blanc F, Zhou K, Lin T, Liu X, Hissier P, Samazan F, Amigues B, Yang ED, Park H, Pylypenko O, Cecchini M, Sindelar CV, Sweeney HL, Houdusse A, Nat Commun. 2016 Sep 1;7:12456. doi: 10.1038/ncomms12456. PMID:27580874
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (522 Kb) [Save to disk]
  • Biological Unit Coordinates (5i0h.pdb1.gz) 260 Kb
  • Biological Unit Coordinates (5i0h.pdb2.gz) 259 Kb
  • LPC: Ligand-Protein Contacts for 5I0H
  • CSU: Contacts of Structural Units for 5I0H
  • Structure Factors (1355 Kb)
  • Retrieve 5I0H in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5I0H from S2C, [Save to disk]
  • Re-refined 5i0h structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 5I0H in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 5I0H
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • Fold representative 5i0h from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5i0h_B] [5i0h] [5i0h_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domain found in 5I0H: [MYSc ] by SMART
  • Other resources with information on 5I0H
  • Community annotation for 5I0H at PDBWiki (http://pdbwiki.org)

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