5J39 date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand CAC, UNX enzyme
Primary referenceStructural basis for arginine methylation-independent recognition of PIWIL1 by TDRD2., Zhang H, Liu K, Izumi N, Huang H, Ding D, Ni Z, Sidhu SS, Chen C, Tomari Y, Min J, Proc Natl Acad Sci U S A. 2017 Nov 8. pii: 201711486. doi:, 10.1073/pnas.1711486114. PMID:29118143
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (133 Kb) [Save to disk]
  • Biological Unit Coordinates (5j39.pdb1.gz) 65 Kb
  • Biological Unit Coordinates (5j39.pdb2.gz) 64 Kb
  • LPC: Ligand-Protein Contacts for 5J39
  • CSU: Contacts of Structural Units for 5J39
  • Structure Factors (3396 Kb)
  • Retrieve 5J39 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5J39 from S2C, [Save to disk]
  • Re-refined 5j39 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 5J39 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5j39] [5j39_A] [5j39_B]
  • SWISS-PROT database:
  • Domain found in 5J39: [TUDOR ] by SMART

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