5KDL date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand GSP, MG enzyme
Gene
Ontology
ChainFunctionProcessComponent
B, A


Primary referenceA conserved hydrophobic core in Galphai1 regulates G protein activation and release from activated receptor., Kaya AI, Lokits AD, Gilbert JA, Iverson TM, Meiler J, Hamm HE, J Biol Chem. 2016 Jul 26. pii: jbc.M116.745513. PMID:27462082
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (106 Kb) [Save to disk]
  • Biological Unit Coordinates (5kdl.pdb1.gz) 52 Kb
  • Biological Unit Coordinates (5kdl.pdb2.gz) 52 Kb
  • LPC: Ligand-Protein Contacts for 5KDL
  • CSU: Contacts of Structural Units for 5KDL
  • Structure Factors (385 Kb)
  • Retrieve 5KDL in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5KDL from S2C, [Save to disk]
  • Re-refined 5kdl structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 5KDL in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5kdl] [5kdl_A] [5kdl_B]
  • SWISS-PROT database:
  • Domain found in 5KDL: [G_alpha ] by SMART

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