5MDM		date
authors
compound		source
symmetry		R_factor R_Free
crystal cell	length a length b length c angle alpha angle beta angle gamma
method	X-Ray Diffraction	resolution
ligand	FUC, NAG, SO4	enzyme
Gene Ontology	Chain Function Process Component F, C, A, E
Primary reference	Structural intermediates in the fusion-associated transition of vesiculovirus glycoprotein., Baquero E, Albertini AA, Raux H, Abou-Hamdan A, Boeri-Erba E, Ouldali M, Buonocore L, Rose JK, Lepault J, Bressanelli S, Gaudin Y, EMBO J. 2017 Mar 1;36(5):679-692. doi: 10.15252/embj.201694565. Epub 2017 Feb 10. PMID:28188244

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (556 Kb) [Save to disk] Biological Unit Coordinates (5mdm.pdb1.gz) 277 Kb Biological Unit Coordinates (5mdm.pdb2.gz) 273 Kb LPC: Ligand-Protein Contacts for 5MDM CSU: Contacts of Structural Units for 5MDM Structure Factors (462 Kb) Retrieve 5MDM in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 5MDM from S2C, [Save to disk] Re-refined 5mdm structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 5MDM in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [5mdm] [5mdm_A] [5mdm_C] [5mdm_E] [5mdm_F] SWISS-PROT database:

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