5NDZ date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand 8UN, NA enzyme
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceStructural insight into allosteric modulation of protease-activated receptor 2., Cheng RKY, Fiez-Vandal C, Schlenker O, Edman K, Aggeler B, Brown DG, Brown GA, Cooke RM, Dumelin CE, Dore AS, Geschwindner S, Grebner C, Hermansson NO, Jazayeri A, Johansson P, Leong L, Prihandoko R, Rappas M, Soutter H, Snijder A, Sundstrom L, Tehan B, Thornton P, Troast D, Wiggin G, Zhukov A, Marshall FH, Dekker N, Nature. 2017 Apr 26. doi: 10.1038/nature22309. PMID:28445455
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (96 Kb) [Save to disk]
  • Biological Unit Coordinates (5ndz.pdb1.gz) 90 Kb
  • LPC: Ligand-Protein Contacts for 5NDZ
  • CSU: Contacts of Structural Units for 5NDZ
  • Structure Factors (88 Kb)
  • Retrieve 5NDZ in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5NDZ from S2C, [Save to disk]
  • Re-refined 5ndz structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 5NDZ in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5ndz] [5ndz_A]
  • SWISS-PROT database:

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