5NYG		date
authors
compound		source
symmetry		R_factor R_Free
crystal cell	length a length b length c angle alpha angle beta angle gamma
method	X-Ray Diffraction	resolution
ligand	TRS	enzyme
Gene	HYPMC
Gene Ontology	Chain Function Process Component B, E, A, C, H, D, G, F
Primary reference	On the Trails of the Proteasome Fold: Structural and Functional Analysis of the Ancestral beta-Subunit Protein Anbu., Vielberg MT, Bauer VC, Groll M, J Mol Biol. 2018 Feb 2. pii: S0022-2836(18)30007-X. doi:, 10.1016/j.jmb.2018.01.004. PMID:29355501

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (624 Kb) [Save to disk] Biological Unit Coordinates (5nyg.pdb1.gz) 157 Kb Biological Unit Coordinates (5nyg.pdb2.gz) 618 Kb Biological Unit Coordinates (5nyg.pdb3.gz) 157 Kb Biological Unit Coordinates (5nyg.pdb4.gz) 159 Kb Biological Unit Coordinates (5nyg.pdb5.gz) 157 Kb LPC: Ligand-Protein Contacts for 5NYG CSU: Contacts of Structural Units for 5NYG Structure Factors (764 Kb) Retrieve 5NYG in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 5NYG from S2C, [Save to disk] Re-refined 5nyg structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 5NYG in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [5nyg] [5nyg_A] [5nyg_B] [5nyg_C] [5nyg_D] [5nyg_E] [5nyg_F] [5nyg_G] [5nyg_H] SWISS-PROT database:

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