5OED Hydrolase date Jul 07, 2017
title Human Rab32:Gdp In Complex With Salmonella Gtge C45a Mutant
authors R.Wachtel, B.Braeuning, S.L.Mader, F.Ecker, V.R.I.Kaila, M.Groll,
compound source
Molecule: Gtge
Chain: A
Synonym: Virulence Protein
Engineered: Yes
Organism_scientific: Salmonella Choleraesuis
Organism_taxid: 28901
Gene: Gtge, In36_21720, In69_16745, In77_18825
Expression_system: Escherichia Coli
Expression_system_taxid: 562

Molecule: Ras-Related Protein Rab-32
Chain: B
Engineered: Yes

Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Rab32
Expression_system: Escherichia Coli
Expression_system_taxid: 562
symmetry Space Group: P 65 2 2
R_factor 0.201 R_Free 0.240
length a length b length c angle alpha angle beta angle gamma
67.410 67.410 427.340 90.00 90.00 120.00
method X-Ray Diffractionresolution 2.90 Å
ligand GDP, MG, MLY enzyme

Primary referenceThe protease GtgE from Salmonella exclusively targets inactive Rab GTPases., Wachtel R, Brauning B, Mader SL, Ecker F, Kaila VRI, Groll M, Itzen A, Nat Commun. 2018 Jan 3;9(1):44. doi: 10.1038/s41467-017-02110-1. PMID:29298974
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (193 Kb) [Save to disk]
  • Biological Unit Coordinates (5oed.pdb1.gz) 183 Kb
  • LPC: Ligand-Protein Contacts for 5OED
  • CSU: Contacts of Structural Units for 5OED
  • Structure Factors (113 Kb)
  • Retrieve 5OED in mmCIF format [Save to disk]
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  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • Fold representative 5oed from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5oed_B] [5oed_A]
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