5T0G date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand ATP, ZN enzyme
Gene
Ontology
ChainFunctionProcessComponent
A
  • proteasome-activating ATPase...


  • B
  • proteasome-activating ATPase...


  • C


    D
  • proteasome-activating ATPase...


  • E

  • proteasome complex
  • F


    G
  • positive regulation of NF-ka...

  • H


    I


    J


    K


    L


    M


    N


    O


    P


    Q


    R


    S


    T


    U
  • enzyme regulator activity


  • V
  • enzyme regulator activity


  • W


    X


    Y
  • enzyme regulator activity


  • Z


    a


    b


    c
  • endopeptidase activator acti...


  • d


    e


    f


    Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (3291 Kb) [Save to disk]
  • Biological Unit Coordinates (5t0g.pdb1.gz) 3275 Kb
  • LPC: Ligand-Protein Contacts for 5T0G
  • CSU: Contacts of Structural Units for 5T0G
  • Retrieve 5T0G in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5T0G from S2C, [Save to disk]
  • View 5T0G in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 5T0G
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • Fold representative 5t0g from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5t0g] [5t0g_A] [5t0g_B] [5t0g_C] [5t0g_D] [5t0g_E] [5t0g_F] [5t0g_G] [5t0g_H] [5t0g_I] [5t0g_J] [5t0g_K] [5t0g_L] [5t0g_M] [5t0g_N] [5t0g_O] [5t0g_P] [5t0g_Q] [5t0g_R] [5t0g_S] [5t0g_T] [5t0g_U] [5t0g_V] [5t0g_W] [5t0g_X] [5t0g_Y] [5t0g_Z] [5t0g_a] [5t0g_b] [5t0g_c] [5t0g_d] [5t0g_e] [5t0g_f]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domains found in 5T0G: [AAA] [DSS1_SEM1] [JAB_MPN] [PAM] [PINT] [Proteasome_A_N] [UIM] [VWA ] by SMART
  • Other resources with information on 5T0G
  • Community annotation for 5T0G at PDBWiki (http://pdbwiki.org)

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