5TH3 date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand ACT, EDO, MG, MSE enzyme
Gene
Ontology
ChainFunctionProcessComponent
A, B, D, C


Primary referenceDNA recognition by the SwaI restriction endonuclease involves unusual distortion of an 8 base pair A:T-rich target., Shen BW, Heiter DF, Lunnen KD, Wilson GG, Stoddard BL, Nucleic Acids Res. 2017 Feb 17;45(3):1516-1528. doi: 10.1093/nar/gkw1200. PMID:28180307
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (422 Kb) [Save to disk]
  • Biological Unit Coordinates (5th3.pdb1.gz) 207 Kb
  • Biological Unit Coordinates (5th3.pdb2.gz) 209 Kb
  • LPC: Ligand-Protein Contacts for 5TH3
  • CSU: Contacts of Structural Units for 5TH3
  • Structure Factors (1737 Kb)
  • Retrieve 5TH3 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5TH3 from S2C, [Save to disk]
  • Re-refined 5th3 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 5TH3 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5th3] [5th3_A] [5th3_B] [5th3_C] [5th3_D] [5th3_H] [5th3_I] [5th3_J] [5th3_K] [5th3_h] [5th3_i] [5th3_j] [5th3_k]
  • SWISS-PROT database:

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