5TYF date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand DTT, EDO, EPE, GOA, MG, NA enzyme
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceTime-lapse crystallography snapshots of a double-strand break repair polymerase in action., Jamsen JA, Beard WA, Pedersen LC, Shock DD, Moon AF, Krahn JM, Bebenek K, Kunkel TA, Wilson SH, Nat Commun. 2017 Aug 15;8(1):253. doi: 10.1038/s41467-017-00271-7. PMID:28811466
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (147 Kb) [Save to disk]
  • Biological Unit Coordinates (5tyf.pdb1.gz) 141 Kb
  • LPC: Ligand-Protein Contacts for 5TYF
  • CSU: Contacts of Structural Units for 5TYF
  • Structure Factors (828 Kb)
  • Retrieve 5TYF in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5TYF from S2C, [Save to disk]
  • View 5TYF in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5tyf_A] [5tyf_D] [5tyf_P] [5tyf_T]
  • SWISS-PROT database:

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