5UP4		date
authors
compound		source
symmetry		R_factor R_Free
crystal cell	length a length b length c angle alpha angle beta angle gamma
method	X-Ray Diffraction	resolution
Gene Ontology	Chain Function Process Component O, P, E, C, H, L, Q, K, B, I, M, R, D, N, S, J, F, G
Primary reference	Quenching protein dynamics interferes with HIV capsid maturation., Wang M, Quinn CM, Perilla JR, Zhang H, Shirra R Jr, Hou G, Byeon IJ, Suiter CL, Ablan S, Urano E, Nitz TJ, Aiken C, Freed EO, Zhang P, Schulten K, Gronenborn AM, Polenova T, Nat Commun. 2017 Nov 24;8(1):1779. doi: 10.1038/s41467-017-01856-y. PMID:29176596

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (525 Kb) [Save to disk] Biological Unit Coordinates (5up4.pdb1.gz) 520 Kb CSU: Contacts of Structural Units for 5UP4 Retrieve 5UP4 in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 5UP4 from S2C, [Save to disk]

View 5UP4 in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [5up4_B] [5up4_C] [5up4_D] [5up4_E] [5up4_F] [5up4_G] [5up4_H] [5up4_I] [5up4_J] [5up4_K] [5up4_L] [5up4_M] [5up4_N] [5up4_O] [5up4_P] [5up4_Q] [5up4_R] [5up4_S] SWISS-PROT database:

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