5V1H date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand 8OG enzyme
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceCapturing a mammalian DNA polymerase extending from an oxidized nucleotide., Whitaker AM, Smith MR, Schaich MA, Freudenthal BD, Nucleic Acids Res. 2017 Apr 26. doi: 10.1093/nar/gkx293. PMID:28449123
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (78 Kb) [Save to disk]
  • Biological Unit Coordinates (5v1h.pdb1.gz) 73 Kb
  • LPC: Ligand-Protein Contacts for 5V1H
  • CSU: Contacts of Structural Units for 5V1H
  • Structure Factors (423 Kb)
  • Retrieve 5V1H in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5V1H from S2C, [Save to disk]
  • Re-refined 5v1h structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 5V1H in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5v1h] [5v1h_A] [5v1h_D] [5v1h_P] [5v1h_T]
  • SWISS-PROT database:

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