5V5K date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
Gene
Ontology
ChainFunctionProcessComponent
C, E, B, H, G, F, D, A


Primary referenceThermophilic Ferritin 24mer Assembly and Nanoparticle Encapsulation Modulated by Interdimer Electrostatic Repulsion., Pulsipher KW, Villegas JA, Roose BW, Hicks TL, Yoon J, Saven JG, Dmochowski IJ, Biochemistry. 2017 Jul 18;56(28):3596-3606. doi: 10.1021/acs.biochem.7b00296., Epub 2017 Jul 6. PMID:28682599
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (137 Kb) [Save to disk]
  • Biological Unit Coordinates (5v5k.pdb1.gz) 378 Kb
  • CSU: Contacts of Structural Units for 5V5K
  • Structure Factors (863 Kb)
  • Retrieve 5V5K in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5V5K from S2C, [Save to disk]
  • Re-refined 5v5k structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 5V5K in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5v5k_A] [5v5k_B] [5v5k_C] [5v5k_D] [5v5k_E] [5v5k_F] [5v5k_G] [5v5k_H]
  • SWISS-PROT database:

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