OCA Atlas for 5V8W

5V8W

date

authors

compound

source

symmetry

R_factor

R_Free

crystal
cell

length a	length b	length c	angle alpha	angle beta	angle gamma

method

X-Ray Diffraction

resolution

Gene
Ontology

Chain	Function	Process	Component
C, A, E, G

Primary reference

Molecular basis for the interaction between Integrator subunits IntS9 and IntS11 and its functional importance., Wu Y, Albrecht TR, Baillat D, Wagner EJ, Tong L, Proc Natl Acad Sci U S A. 2017 Apr 25;114(17):4394-4399. doi:, 10.1073/pnas.1616605114. Epub 2017 Apr 10. PMID:28396433

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (250 Kb) [Save to disk]

Biological Unit Coordinates (5v8w.pdb1.gz) 63 Kb

Biological Unit Coordinates (5v8w.pdb2.gz) 63 Kb

Biological Unit Coordinates (5v8w.pdb3.gz) 58 Kb

Biological Unit Coordinates (5v8w.pdb4.gz) 63 Kb

CSU: Contacts of Structural Units for 5V8W

Structure Factors (976 Kb)

Retrieve 5V8W in mmCIF format [Save to disk]

SEQRES to COORDINATES correlation for 5V8W from S2C, [Save to disk]

Re-refined 5v8w structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 5V8W in 3D

Proteopedia, because life has more than 2D.

On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.

On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [5v8w] [5v8w_A] [5v8w_B] [5v8w_C] [5v8w_D] [5v8w_E] [5v8w_F] [5v8w_G] [5v8w_H]

SWISS-PROT database:

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