5VBN date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand SO4, ZN enzyme
Gene
Ontology
ChainFunctionProcessComponent
A, E


F, B


Primary referenceCrystal structure of the human Pol B-subunit in complex with the C-terminal domain of the catalytic subunit., Baranovskiy AG, Gu J, Babayeva ND, Kurinov I, Pavlov YI, Tahirov TH, J Biol Chem. 2017 Jul 26. pii: jbc.M117.792705. doi: 10.1074/jbc.M117.792705. PMID:28747437
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (186 Kb) [Save to disk]
  • Biological Unit Coordinates (5vbn.pdb1.gz) 92 Kb
  • Biological Unit Coordinates (5vbn.pdb2.gz) 91 Kb
  • LPC: Ligand-Protein Contacts for 5VBN
  • CSU: Contacts of Structural Units for 5VBN
  • Structure Factors (587 Kb)
  • Retrieve 5VBN in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5VBN from S2C, [Save to disk]
  • Re-refined 5vbn structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 5VBN in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5vbn_A] [5vbn_B] [5vbn_E] [5vbn_F]
  • SWISS-PROT database:

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