5VK2 date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand BMA, FUC, MAN, NAG enzyme
Gene
Ontology
ChainFunctionProcessComponent
b, a, A, c, B, C


Primary referenceStructural basis for antibody-mediated neutralization of Lassa virus., Hastie KM, Zandonatti MA, Kleinfelter LM, Heinrich ML, Rowland MM, Chandran K, Branco LM, Robinson JE, Garry RF, Saphire EO, Science. 2017 Jun 2;356(6341):923-928. doi: 10.1126/science.aam7260. PMID:28572385
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (749 Kb) [Save to disk]
  • Biological Unit Coordinates (5vk2.pdb1.gz) 735 Kb
  • LPC: Ligand-Protein Contacts for 5VK2
  • CSU: Contacts of Structural Units for 5VK2
  • Structure Factors (518 Kb)
  • Retrieve 5VK2 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5VK2 from S2C, [Save to disk]
  • Re-refined 5vk2 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 5VK2 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5vk2_A] [5vk2_B] [5vk2_C] [5vk2_D] [5vk2_E] [5vk2_F] [5vk2_G] [5vk2_H] [5vk2_L] [5vk2_a] [5vk2_b] [5vk2_c]
  • SWISS-PROT database:

  • You may enter another PDB ID code
    Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]
    OCA© by Jaime Prilusky, 1996-2014,2022,2024
    Bioinformatics Unit
    Weizmann Institute of Science