5YQ5		date
authors
compound		source
symmetry		R_factor R_Free
crystal cell	length a length b length c angle alpha angle beta angle gamma
method	X-Ray Diffraction	resolution
ligand	NAG, PO4	enzyme
Gene Ontology	Chain Function Process Component A, D, B, C
Primary reference	Molecular basis for governing the morphology of type-I collagen fibrils by Osteomodulin., Tashima T, Nagatoishi S, Caaveiro JMM, Nakakido M, Sagara H, Kusano-Arai O, Iwanari H, Mimuro H, Hamakubo T, Ohnuma SI, Tsumoto K, Commun Biol. 2018 Apr 19;1:33. doi: 10.1038/s42003-018-0038-2. eCollection 2018. PMID:30271919

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (217 Kb) [Save to disk] Biological Unit Coordinates (5yq5.pdb1.gz) 54 Kb Biological Unit Coordinates (5yq5.pdb2.gz) 54 Kb Biological Unit Coordinates (5yq5.pdb3.gz) 55 Kb Biological Unit Coordinates (5yq5.pdb4.gz) 56 Kb LPC: Ligand-Protein Contacts for 5YQ5 CSU: Contacts of Structural Units for 5YQ5 Structure Factors (4949 Kb) Retrieve 5YQ5 in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 5YQ5 from S2C, [Save to disk]

View 5YQ5 in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [5yq5_A] [5yq5_B] [5yq5_C] [5yq5_D] SWISS-PROT database:

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