5ZJK Structure of myroilysin date
authors Li, W.D., Ran, T.T., Xu, D.Q., Wang, W.W.
compound source
symmetry
R_factor
R_Free 0.2537
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 2.60
ligand PO4, ZN enzyme
Gene
Ontology
ChainFunctionProcessComponent
F, N, K, E, Q, M, C, L, A, J, O, P, B, H, D, R, I, G


Primary referenceCrystal structure of mature myroilysin and implication for its activation mechanism., Ran T, Li W, Sun B, Xu M, Qiu S, Xu DQ, He J, Wang W, Int J Biol Macromol. 2019 Nov 28. pii: S0141-8130(19)36556-0. doi:, 10.1016/j.ijbiomac.2019.11.205. PMID:31785296
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (610 Kb) [Save to disk]
  • Biological Unit Coordinates (5zjk.pdb1.gz) 41 Kb
  • Biological Unit Coordinates (5zjk.pdb2.gz) 42 Kb
  • Biological Unit Coordinates (5zjk.pdb3.gz) 41 Kb
  • Biological Unit Coordinates (5zjk.pdb4.gz) 42 Kb
  • Biological Unit Coordinates (5zjk.pdb5.gz) 41 Kb
  • Biological Unit Coordinates (5zjk.pdb6.gz) 41 Kb
  • Biological Unit Coordinates (5zjk.pdb7.gz) 41 Kb
  • Biological Unit Coordinates (5zjk.pdb8.gz) 41 Kb
  • Biological Unit Coordinates (5zjk.pdb9.gz) 41 Kb
  • LPC: Ligand-Protein Contacts for 5ZJK
  • CSU: Contacts of Structural Units for 5ZJK
  • Structure Factors (5948 Kb)
  • Retrieve 5ZJK in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5ZJK from S2C, [Save to disk]
    • View 5ZJK in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 5ZJK
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5zjk_H] [5zjk_P] [5zjk_B] [5zjk_N] [5zjk_L] [5zjk_R] [5zjk_G] [5zjk_I] [5zjk_Q] [5zjk_M] [5zjk_K] [5zjk_D] [5zjk_F] [5zjk_J] [5zjk_E] [5zjk_A] [5zjk_O] [5zjk_C]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
    • Other resources with information on 5ZJK
  • Community annotation for 5ZJK at PDBWiki (http://pdbwiki.org)

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