6E7K Hydrolase date Jul 26, 2018
title Structure Of The Lipoprotein Lipase Gpihbp1 Complex That Med Plasma Triglyceride Hydrolysis
authors G.Birrane, M.Meiyappan
compound source
Molecule: Lipoprotein Lipase
Chain: A, B
Fragment: Unp Residues 28-475
Synonym: Lpl
Engineered: Yes
Mutation: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Lpl, Lipd
Expression_system: Homo Sapiens
Expression_system_common: Human
Expression_system_taxid: 9606
Expression_system_cell_line: Ht1080
Expression_system_tissue: Connective Tissue
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pz804n

Molecule: Glycosylphosphatidylinositol-Anchored High Densit Lipoprotein-Binding Protein 1;
Chain: C, D
Fragment: Unp Residues 21-151
Synonym: Gpihbp1, Gpi-Anchored Hdl-Binding Protein 1, High Lipoprotein-Binding Protein 1;
Engineered: Yes

Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Gpihbp1, Hbp1
Expression_system: Spodoptera Frugiperda
Expression_system_common: Fall Armyworm
Expression_system_taxid: 7108
Expression_system_cell_line: Sf9
Expression_system_vector_type: Bacmid
Expression_system_plasmid: Pfastbac-1
symmetry Space Group: P 21 21 2
R_factor 0.195 R_Free 0.235
length a length b length c angle alpha angle beta angle gamma
101.948 153.206 95.783 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.80 Å
ligand BMA, CA, FUC, NAG enzyme Hydrolase E.C. BRENDA
A, B
  • lipoprotein lipase activity
  • positive regulation of seque...
  • positive regulation of chemo...

  • Primary referenceStructure of the lipoprotein lipase-GPIHBP1 complex that mediates plasma triglyceride hydrolysis., Birrane G, Beigneux AP, Dwyer B, Strack-Logue B, Kristensen KK, Francone OL, Fong LG, Mertens HDT, Pan CQ, Ploug M, Young SG, Meiyappan M, Proc Natl Acad Sci U S A. 2018 Dec 17. pii: 1817984116. doi:, 10.1073/pnas.1817984116. PMID:30559189
    Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (341 Kb) [Save to disk]
  • Biological Unit Coordinates (6e7k.pdb1.gz) 167 Kb
  • Biological Unit Coordinates (6e7k.pdb2.gz) 168 Kb
  • LPC: Ligand-Protein Contacts for 6E7K
  • CSU: Contacts of Structural Units for 6E7K
  • Structure Factors (1072 Kb)
  • Retrieve 6E7K in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 6E7K from S2C, [Save to disk]
  • View 6E7K in 3D
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  • Visual 3D analysis of 6E7K
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  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • Fold representative 6e7k from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [6e7k_C] [6e7k_A] [6e7k_D] [6e7k_B]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 6E7K
  • Community annotation for 6E7K at PDBWiki (http://pdbwiki.org)

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