6FF8 Signaling Protein date Jan 04, 2018
title Crystal Structure Of Uncomplexed Rab32 In The Active Gtp-Bou At 2.13 Angstrom Resolution
authors A.R.Khan, T.Kecman
compound source
Molecule: Ras-Related Protein Rab-32
Chain: A, B
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Rab32
Expression_system: Escherichia Coli
Expression_system_taxid: 562
symmetry Space Group: P 43
R_factor 0.191 R_Free 0.223
crystal
cell
length a length b length c angle alpha angle beta angle gamma
53.658 53.658 129.784 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.13 Å
ligand GTP, MG enzyme
Gene
Ontology
ChainFunctionProcessComponent
A, B


Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (124 Kb) [Save to disk]
  • Biological Unit Coordinates (6ff8.pdb1.gz) 61 Kb
  • Biological Unit Coordinates (6ff8.pdb2.gz) 60 Kb
  • LPC: Ligand-Protein Contacts for 6FF8
  • CSU: Contacts of Structural Units for 6FF8
  • Structure Factors (423 Kb)
  • Retrieve 6FF8 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 6FF8 from S2C, [Save to disk]
  • View 6FF8 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 6FF8
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • Fold representative 6ff8 from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [6ff8_A] [6ff8_B]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 6FF8
  • Community annotation for 6FF8 at PDBWiki (http://pdbwiki.org)

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