6GQ3 Biosynthetic Protein date Jun 07, 2018
title Human Asparagine Synthetase (Asns) In Complex With 6-Diazo-5 Norleucine (Don) At 1.85 A Resolution
authors W.Zhu, A.Radadiya, C.Bisson, Y.Jin, B.E.Nordin, T.Imasaki, S.Wenze S.E.Sedelnikova, A.H.Berry, T.K.Nomanbhoy, J.W.Kozarich, Y.Taka D.W.Rice, N.G.J.Richards
compound source
Molecule: Asparagine Synthetase [Glutamine-Hydrolyzing]
Chain: A, B
Synonym: Cell Cycle Control Protein Ts11,Glutamine-Dependen Asparagine Synthetase;
Ec: 6.3.5.4
Engineered: Yes
Other_details: Missing Loops: 210-223 And 466-480. No Elect
Density For C-Terminus: 535-561
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Asns, Ts11
Expression_system: Spodoptera Frugiperda
Expression_system_common: Fall Armyworm
Expression_system_taxid: 7108
Expression_system_vector_type: Baculovirus
symmetry Space Group: P 1 21 1
R_factor 0.178 R_Free 0.225
crystal
cell
length a length b length c angle alpha angle beta angle gamma
64.700 83.520 110.290 90.00 90.65 90.00
method X-Ray Diffractionresolution 1.85 Å
ligand CL, EDO, EPE, ONL enzyme Ligase E.C.6.3.5.4 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A, B
  • asparagine synthase (glutami...


  • Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (186 Kb) [Save to disk]
  • Biological Unit Coordinates (6gq3.pdb1.gz) 93 Kb
  • Biological Unit Coordinates (6gq3.pdb2.gz) 93 Kb
  • LPC: Ligand-Protein Contacts for 6GQ3
  • CSU: Contacts of Structural Units for 6GQ3
  • Structure Factors (5545 Kb)
  • Retrieve 6GQ3 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 6GQ3 from S2C, [Save to disk]
  • View 6GQ3 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 6GQ3
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • Fold representative 6gq3 from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [6gq3_A] [6gq3_B]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 6GQ3
  • Community annotation for 6GQ3 at PDBWiki (http://pdbwiki.org)

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