6H2U Transferase date Jul 16, 2018
title Crystal Structure Of Human Mettl5-Trmt112 Complex, The 18s R M6a1832 Methyltransferase At 1.6a Resolution
authors N.Van Tran, M.Graille
compound source
Molecule: Methyltransferase-Like Protein 5
Chain: A
Ec: 2.1.1.-
Engineered: Yes
 Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Mettl5, Dc3, Hspc133
Expression_system: Escherichia Coli
Expression_system_taxid: 562

Molecule: Multifunctional Methyltransferase Subunit Trm112- Protein;
Chain: B
Synonym: Trna Methyltransferase 112 Homolog
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Trmt112, Ad-001, Hspc152, Hspc170
Expression_system: Escherichia Coli
Expression_system_taxid: 562
symmetry Space Group: P 21 21 21
R_factor 0.186 R_Free 0.215
crystal
cell
length a length b length c angle alpha angle beta angle gamma
56.887 70.634 84.776 90.00 90.00 90.00
method X-Ray Diffractionresolution 1.60 Å
ligand CSD, CSO, EDO, SAM, SO4 enzyme Transferase E.C.2.1.1 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A


B


Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (121 Kb) [Save to disk]
  • Biological Unit Coordinates (6h2u.pdb1.gz) 116 Kb
  • LPC: Ligand-Protein Contacts for 6H2U
  • CSU: Contacts of Structural Units for 6H2U
  • Structure Factors (988 Kb)
  • Retrieve 6H2U in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 6H2U from S2C, [Save to disk]
    • View 6H2U in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 6H2U
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [6h2u_B] [6h2u_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
    • Other resources with information on 6H2U
  • Community annotation for 6H2U at PDBWiki (http://pdbwiki.org)

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