6L9F Protein Binding date Nov 09, 2019
title Crystal Structure Of Tead4 In Complex With A Novel Fam181a P
authors M.Chen, Z.Zhou
compound source
Molecule: Transcriptional Enhancer Factor Tef-3
Chain: A, B
Synonym: Etf-Related Factor 2,Etfr-2,Tea Domain Family Memb 4,Tef-1-Related Factor 1,Tef-1-Related Factor Fr-19,Rtef-1;
Engineered: Yes
Organism_scientific: Mus Musculus
Organism_common: Mouse
Organism_taxid: 10090
Gene: Tead4, Tcf13r1, Tef3, Tefr1
Expression_system: Escherichia Coli Bl21(De3)
Expression_system_taxid: 469008
Expression_system_strain: Bl21(De3)
Expression_system_variant: Codonplus

Molecule: Protein Fam181a
Chain: C, D
Engineered: Yes

Synthetic: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
symmetry Space Group: P 64 2 2
R_factor 0.190 R_Free 0.253
crystal
cell
length a length b length c angle alpha angle beta angle gamma
110.009 110.009 182.711 90.00 90.00 120.00
method X-Ray Diffractionresolution 2.56 Å
ligand ACT, P1L enzyme
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (84 Kb) [Save to disk]
  • Biological Unit Coordinates (6l9f.pdb1.gz) 39 Kb
  • Biological Unit Coordinates (6l9f.pdb2.gz) 41 Kb
  • LPC: Ligand-Protein Contacts for 6L9F
  • CSU: Contacts of Structural Units for 6L9F
  • Structure Factors (560 Kb)
  • Retrieve 6L9F in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 6L9F from S2C, [Save to disk]
  • View 6L9F in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 6L9F
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • Fold representative 6l9f from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [6l9f_A] [6l9f_D] [6l9f_B] [6l9f_C]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 6L9F
  • Community annotation for 6L9F at PDBWiki (http://pdbwiki.org)

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