6MBW Transcription Activator date Aug 30, 2018
title Structure Of Transcription Factor
authors H.S.Seo, S.Dhe-Paganon
compound source
Molecule: Signal Transducer And Activator Of Transcription
Chain: A, B
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Stat5b
Expression_system: Escherichia Coli Bl21(De3)
Expression_system_taxid: 469008
Expression_system_strain: Bl21(De3)
Expression_system_vector_type: Plasmid
symmetry Space Group: P 21 21 2
R_factor 0.266 R_Free 0.305
crystal
cell
length a length b length c angle alpha angle beta angle gamma
134.600 138.620 76.500 90.00 90.00 90.00
method X-Ray Diffractionresolution 3.29 Å
Gene
Ontology
ChainFunctionProcessComponent
A, B


Primary referenceStructural and functional consequences of the STAT5B(N642H) driver mutation., de Araujo ED, Erdogan F, Neubauer HA, Meneksedag-Erol D, Manaswiyoungkul P, Eram MS, Seo HS, Qadree AK, Israelian J, Orlova A, Suske T, Pham HTT, Boersma A, Tangermann S, Kenner L, Rulicke T, Dong A, Ravichandran M, Brown PJ, Audette GF, Rauscher S, Dhe-Paganon S, Moriggl R, Gunning PT, Nat Commun. 2019 Jun 7;10(1):2517. doi: 10.1038/s41467-019-10422-7. PMID:31175292
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (164 Kb) [Save to disk]
  • Biological Unit Coordinates (6mbw.pdb1.gz) 79 Kb
  • Biological Unit Coordinates (6mbw.pdb2.gz) 81 Kb
  • CSU: Contacts of Structural Units for 6MBW
  • Structure Factors (923 Kb)
  • Retrieve 6MBW in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 6MBW from S2C, [Save to disk]
  • View 6MBW in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 6MBW
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • Fold representative 6mbw from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [6mbw_A] [6mbw_B]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 6MBW
  • Community annotation for 6MBW at PDBWiki (http://pdbwiki.org)

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