6NT2 Antitumor Protein date Jan 28, 2019
title Type 1 Prmt In Complex With The Inhibitor Gsk3368715
authors N.O.Concha
compound source
Molecule: Protein Arginine N-Methyltransferase 1
Chain: A, D, B, C
Synonym: Histone-Arginine N-Methyltransferase Prmt1,Interfe Receptor 1-Bound Protein 4;
Ec: 2.1.1.319
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Prmt1, Hmt2, Hrmt1l2, Ir1b4
Expression_system: Escherichia Coli
Expression_system_taxid: 562
symmetry Space Group: P 41 21 2
R_factor 0.190 R_Free 0.222
crystal
cell
length a length b length c angle alpha angle beta angle gamma
174.150 174.150 142.350 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.48 Å
ligand DTT, GOL, KZS, SAH enzyme Transferase E.C.2.1.1.319 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A, D, C, B
  • protein-arginine N-methyltra...
  • protein-arginine omega-N mon...
  • protein-arginine omega-N asy...


  • Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (478 Kb) [Save to disk]
  • Biological Unit Coordinates (6nt2.pdb1.gz) 237 Kb
  • Biological Unit Coordinates (6nt2.pdb2.gz) 236 Kb
  • LPC: Ligand-Protein Contacts for 6NT2
  • CSU: Contacts of Structural Units for 6NT2
  • Structure Factors (1230 Kb)
  • Retrieve 6NT2 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 6NT2 from S2C, [Save to disk]
  • View 6NT2 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 6NT2
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • Fold representative 6nt2 from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [6nt2_C] [6nt2_D] [6nt2_B] [6nt2_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 6NT2
  • Community annotation for 6NT2 at PDBWiki (http://pdbwiki.org)

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